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BaseInfo

ncRNA ID novel_ath_miR918
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:4044476-4044581 [+]
Reference genome TAIR10
Source SRR1164382
Length 24
Mature sequence(if miRNA) 1 - AUGAGUCGGAUUGAUUGAUGAUGA - 24
Stem-loop(if miRNA) --    GU     -U   UG   A G   CA   CU  C     U    ----   AU
  AUGA  CGGAU  GAU  AUG U AGG  UGG  AA GUUUU AAGU    AGA  U
  ||||  |||||  |||  ||| | |||  |||  || ||||| ||||    |||
  UAUU  GUCUA  UUA  UAC G UUC  ACC  UU CAAGA UUCG    UCU  C
UC    UG     CU   GU   A G   --   -U  -     -    ACGU   AG
Stem-loop sequence AUGAGUCGGAUUGAUUGAUGAUGAGGCAUGGCUAACGUUUUUAAGUAGAAUUCGAUCUUGCAGCUUAGAACUUUCCACUUGGACAUUGAUUUCAUCUGGUUUAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:24   AGUAGU-AGUUAGUUAGGCUGAGUA   1
  ||||=|-||||||||||||||||||
targets:2422   UCAUUAAUCAAUCAAUCCGACUCAU   2446

2.0 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget