ncRNA ID | novel_ath_miR918 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:4044476-4044581 [+] |
Reference genome | TAIR10 |
Source | SRR1164382 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAGUCGGAUUGAUUGAUGAUGA - 24 |
Stem-loop(if miRNA) |
--    GU     -U   UG   A G   CA   CU  C     U    ----   AU   AUGA  CGGAU  GAU  AUG U AGG  UGG  AA GUUUU AAGU    AGA  U   ||||  |||||  |||  ||| | |||  |||  || ||||| ||||    |||   UAUU  GUCUA  UUA  UAC G UUC  ACC  UU CAAGA UUCG    UCU  C UC    UG     CU   GU   A G   --   -U  -     -    ACGU   AG |
Stem-loop sequence | AUGAGUCGGAUUGAUUGAUGAUGAGGCAUGGCUAACGUUUUUAAGUAGAAUUCGAUCUUGCAGCUUAGAACUUUCCACUUGGACAUUGAUUUCAUCUGGUUUAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183005.1 |
|
2.0 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget |