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BaseInfo

ncRNA ID	novel_ath_miR917
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:3120472-3120688 [-]
Reference genome	TAIR10
Source	SRR1164382
Length	23
Mature sequence(if miRNA)	1 - AUUUGGUGUACUGGGUUUCUCUC - 23
Stem-loop(if miRNA)	--  CU GU             GU          UUUUAAUU    U   -UACUA     ---U    -     U         UU           UUAUAUUCUAUCUU      U   GA  A  CUAGUGCACCAAA  GGUGUACUGU        CACU GGU      AUUGG    GUAC CCAUU GGUGUACUA  CUAGUAUACUA              GGCUAG G   ||  |  |||||||||||||  ||||||||||        |||| |||      |||||    |||| ||||| |||||||||  |||||||||||              ||||||   CU  U  GGUCAUGUGGUUU  CCAUGUGAUA        GUGG UCA      UGAUC    CAUG GGUGA UCAUGUGAU  GAUCAUGUGAU              CUGAUC U CU  CU UG             AC          -UUAUCAU    U   CUCUUG     UUAU    U     -         CU           --------------      A
Stem-loop sequence	GACUAGUCUAGUGCACCAAAGUGGUGUACUGUUUUUAAUUCACUUGGUUACUAAUUGGUGUACCCAUUUGGUGUACUAUUCUAGUAUACUAUUAUAUUCUAUCUUGGCUAGUGUACUAGUCUAGUGUACUAGUCUAGUGUACUAGUGGUGUACUAUUCUAGUGUUCUCACUUGGUGUACUAUUAUAGUGUACCCAUUUGGUGUACUGGGUUUCUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_104659.3	ncRNA:23   CUC-UCUUUGGGUCAUGUGGUUUA   1   |||-||||*=|||||||||||||* targets:2218   GAGGAGAAUUCCAGUACACCAAAG   2241 Target Full Sequence	3.0	Arabidopsis thaliana Nucleoporin autopeptidase mRNA	Nucleoporin autopeptidase(AT1G59660)	coding protein	psRNATarget
NM_001333860.1	ncRNA:23   CUC-UCUUUGGGUCAUGUGGUUUA   1   |||-||||*=|||||||||||||* targets:2423   GAGGAGAAUUCCAGUACACCAAAG   2446 Target Full Sequence	3.0	Arabidopsis thaliana Nucleoporin autopeptidase mRNA	Nucleoporin autopeptidase(AT1G59660)	coding protein	psRNATarget
NM_001333861.1	ncRNA:23   CUC-UCUUUGGGUCAUGUGGUUUA   1   |||-||||*=|||||||||||||* targets:2420   GAGGAGAAUUCCAGUACACCAAAG   2443 Target Full Sequence	3.0	Arabidopsis thaliana Nucleoporin autopeptidase mRNA	Nucleoporin autopeptidase(AT1G59660)	coding protein	psRNATarget
NM_111723.4	ncRNA:23   CUCUCUUUGGGUCAUGUGGUUUA   1   ||*=|*|||=||||||||||||* targets:821   GAUGGUAACUCAGUACACCAAAC   843 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein (Protein of unknown function, DUF538) mRNA	hypothetical protein (Protein of unknown function, DUF538)(AT3G08890)	coding protein	psRNATarget