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BaseInfo

ncRNA ID novel_ath_miR904
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:4185893-4185981 [-]
Reference genome TAIR10
Source SRR1164378;SRR1164434
Length 24
Mature sequence(if miRNA) 1 - AUGUGAUUUGGAGCUGUUGACGAG - 24
Stem-loop(if miRNA) --U    U  -      -       --U    GA     U    UG
   GUCA CA CUUUAA UUACAUG   UUAG  UAGAU UGCA  C
   |||| || |||||| |||||||   ||||  ||||| ||||  A
   CAGU GU GAGGUU AGUGUAC   AGUU  GUUUA ACGU  U
GAG    U  C      U       UUU    GC     U    UA
Stem-loop sequence UGUCAUCACUUUAAUUACAUGUUUAGGAUAGAUUUGCAUGCAUAUUGCAUAUUUGCGUUGAUUUCAUGUGAUUUGGAGCUGUUGACGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:24   GAGCAGUUGUCGAGGUUUAGUGUA   1
  ||||||||||||||||||||||*|
targets:2071   CUCGUCAACAGCUCCAAAUCACCU   2094

1.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget