ncRNA ID | novel_ath_miR899 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:11429985-11430167 [-] |
Reference genome | TAIR10 |
Source | SRR1164378 |
Length | 24 |
Mature sequence(if miRNA) | 160 - UUAGUUUAGGGUUUCGUCUUUGAA - 183 |
Stem-loop(if miRNA) |
---        G              A                          C     C        --G          G   AA   AUU    UUAGUUUA GGUUUCGUCUUUGA ACUGUUUGUUUUUUAUUUUUAUGUCC GUUUG UUCAAGGU   UCUUUUGGUU UGU  CUU   G    |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||   |||||||||| |||  |||    AAUCAAGU UCAAAGCAGAAACU UGACAAACAAAAAAUAAAAAUAUAGG CAAAC AAGUUCCA   AGAAAACCAA ACG  GAA   U AAA        G              C                          U     U        AAA          A   AA   GAA |
Stem-loop sequence | UUAGUUUAGGGUUUCGUCUUUGAAACUGUUUGUUUUUUAUUUUUAUGUCCCGUUUGCUUCAAGGUGUCUUUUGGUUGUGUAACUUAUUGUAAGAAGAAGCAAAACCAAAAGAAAAACCUUGAAUCAAACUGGAUAUAAAAAUAAAAAACAAACAGUCUCAAAGACGAAACUGUGAACUAAAAA |