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BaseInfo

ncRNA ID novel_ath_miR892
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:1441503-1441560 [-]
Reference genome TAIR10
Source SRR1164378
Length 24
Mature sequence(if miRNA) 35 - UUUUCCGGUUACCAUUUUCACUCC - 58
Stem-loop(if miRNA) --     C    A               U
  UUUUC GGUU CCAUUUUCACUCCUU A
  ||||| |||| |||||||||||||||
  GAAAG CCAA GGUAAAAGUGAGGAA U
UG     U    A               A
Stem-loop sequence UUUUCCGGUUACCAUUUUCACUCCUUUAUAAAGGAGUGAAAAUGGAAACCUGAAAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_105354.3
ncRNA:24   CCUCACUUUUACCAUUGGCCUUUU   1
  ||||-|||**|||||||||||||*
targets:2687   GGAG-GAAUCUGGUAACCGGAAAU   2709

3.0 Arabidopsis thaliana Leucine-rich repeat protein kinase family protein mRNA Leucine-rich repeat protein kinase family protein(AT1G66830) coding protein psRNATarget