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BaseInfo

ncRNA ID	novel_ath_miR885
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:11103345-11103423 [+]
Reference genome	TAIR10
Source	SRR1164378
Length	23
Mature sequence(if miRNA)	1 - UUUUGAGUUAUAGAUUGCAGGUU - 23
Stem-loop(if miRNA)	--       UU UAGA       UU       -UG    G   UUUUGAG  A    UUGCAGG  AUUUGCA   UUUU G   |||||||  |    |||||||  |||||||   |||| U   AGAAUUU  U    AACGUCU  UGGACGU   AGAG U UA       GG UUGG       -U       UAA    U
Stem-loop sequence	UUUUGAGUUAUAGAUUGCAGGUUAUUUGCAUGUUUUGGUUUGAGAAAUUGCAGGUUUCUGCAAGGUUUGGUUUAAGAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BX814939.1	ncRNA:23   UUG--GACGUUAGAUAUUGAGUUUU   1   |=|--|||*|||||||||||*|||| targets:1602   AGCUACUGAAAUCUAUAACUAAAAA   1626 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT020583.1	ncRNA:23   UUG--GACGUUAGAUAUUGAGUUUU   1   |=|--|||*|||||||||||*|||| targets:1661   AGCUACUGAAAUCUAUAACUAAAAA   1685 Target Full Sequence	2.5	Arabidopsis thaliana At1g07230 gene, complete cds	NA	coding protein	psRNATarget
AY124005.1	ncRNA:23   UUG--GACGUUAGAUAUUGAGUUUU   1   |=|--|||*|||||||||||*|||| targets:1798   AGCUACUGAAAUCUAUAACUAAAAA   1822 Target Full Sequence	2.5	Arabidopsis thaliana At1g07230/F10K1_4 mRNA, complete cds	NA	coding protein	psRNATarget
NM_100597.4	ncRNA:23   UUG--GACGUUAGAUAUUGAGUUUU   1   |=|--|||*|||||||||||*|||| targets:1834   AGCUACUGAAAUCUAUAACUAAAAA   1858 Target Full Sequence	2.5	Arabidopsis thaliana non-specific phospholipase C1 (NPC1), mRNA	non-specific phospholipase C1(NPC1)	coding protein	psRNATarget