ncRNA ID | novel_ath_miR880 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:14798631-14798799 [-] |
Reference genome | TAIR10 |
Source | SRR1163720 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGACUAGUCGGAAAGAUGGAAG - 24 |
Stem-loop(if miRNA) |
--   -     A                           CU         A     A                   GAAGAAAAG   UCC UUUUU CGACUAGUUGAUGAUUGCUUUGGUCAA  UUUCAAAGA UCACA UUUUUUUUAGUUCCUCCUU         G   ||| ||||| |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||   AGG AGAAA GCUGAUCAGCUACUAACGAAACCAGUU  AAGGUUUCU AGUGU AAAGGAAGUUAAGGAGGAA         U GA   U     G                           AC         C     A                   GAAAACAAC |
Stem-loop sequence | UCCUUUUUACGACUAGUUGAUGAUUGCUUUGGUCAACUUUUCAAAGAAUCACAAUUUUUUUUAGUUCCUCCUUGAAGAAAAGGUCAACAAAAGAAGGAGGAAUUGAAGGAAAAUGUGACUCUUUGGAACAUUGACCAAAGCAAUCAUCGACUAGUCGGAAAGAUGGAAG |