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BaseInfo

ncRNA ID novel_ath_miR880
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:14798631-14798799 [-]
Reference genome TAIR10
Source SRR1163720
Length 24
Mature sequence(if miRNA) 1 - AUCGACUAGUCGGAAAGAUGGAAG - 24
Stem-loop(if miRNA) --   -     A                           CU         A     A                   GAAGAAAAG
  UCC UUUUU CGACUAGUUGAUGAUUGCUUUGGUCAA  UUUCAAAGA UCACA UUUUUUUUAGUUCCUCCUU         G
  ||| ||||| |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||
  AGG AGAAA GCUGAUCAGCUACUAACGAAACCAGUU  AAGGUUUCU AGUGU AAAGGAAGUUAAGGAGGAA         U
GA   U     G                           AC         C     A                   GAAAACAAC
Stem-loop sequence UCCUUUUUACGACUAGUUGAUGAUUGCUUUGGUCAACUUUUCAAAGAAUCACAAUUUUUUUUAGUUCCUCCUUGAAGAAAAGGUCAACAAAAGAAGGAGGAAUUGAAGGAAAAUGUGACUCUUUGGAACAUUGACCAAAGCAAUCAUCGACUAGUCGGAAAGAUGGAAG