ncRNA ID | novel_ath_miR879 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:11304567-11304660 [+] |
Reference genome | TAIR10 |
Source | SRR1163720 |
Length | 24 |
Mature sequence(if miRNA) | 71 - UGGAGAUAAUGGAGCAUUCUAGAG - 94 |
Stem-loop(if miRNA) |
--       UUA  UG           GUCUUUUCUAC    UUU  G  U   UUAGAGU   UU  UUAUUUCUAAA           UCCU   CA GU A   |||||||   ||  |||||||||||           ||||   || ||   GAUCUUA   AG  AAUAGAGGUUU           AGGG   GU CA U GA       -CG  GU           -------ACUU    UUU  A  U |
Stem-loop sequence | UUAGAGUUUAUUUGUUAUUUCUAAAGUCUUUUCUACUCCUUUUCAGGUUAUUACAUGUUUGGGAUUCAUUUGGAGAUAAUGGAGCAUUCUAGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK230088.1 |
|
1.5 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-73-D14 | NA | coding protein | psRNATarget |