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BaseInfo

ncRNA ID novel_ath_miR875
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:14987352-14987566 [+]
Reference genome TAIR10
Source SRR1163720;SRR1164378
Length 22
Mature sequence(if miRNA) 194 - AUUAGUUGACUAGUGUGACACA - 215
Stem-loop(if miRNA) --   UG U   U     A            -   CA        UAGG        ----------U    UC   UUA        UCAACU     -    UUUUU       AG
  UGU  U CUA UCAAC AGUGUUUUUUUU GUU  UUUUGGUA    UAAGCAUA           AUUU  CCU   UAUCUUGU      UUUUG ACAA     AGUUUAU  G
  |||  | ||| ||||| |||||||||||| |||  ||||||||    ||||||||           ||||  |||   ||||||||      ||||| ||||     |||||||  A
  ACA  G GAU AGUUG UUACAAAAGAAA CGG  AAAACCAU    GUUUGUAU           UAAG  GGA   AUAGAAUA      AGGAU UGUU     UUAGAUG  A
AC   GU U   C     A            A   UG        --UA        UUUUAAAUAGU    UU   ---        ----UU     G    -UACU       AA
Stem-loop sequence UGUUGUUCUAUUCAACAAGUGUUUUUUUUGUUCAUUUUGGUAUAGGUAAGCAUAUAUUUUCCCUUUAUAUCUUGUUCAACUUUUUGACAAUUUUUAGUUUAUAGGAAAAGUAGAUUUCAUUUGUGUAGGAUUAUAAGAUAAGGUUGAAUUGAUAAAUUUUUAUGUUUGAUUACCAAAAGUGGCAAAAGAAAACAUUAGUUGACUAGUGUGACACA