ncRNA ID | novel_ath_miR875 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:14987352-14987566 [+] |
Reference genome | TAIR10 |
Source | SRR1163720;SRR1164378 |
Length | 22 |
Mature sequence(if miRNA) | 194 - AUUAGUUGACUAGUGUGACACA - 215 |
Stem-loop(if miRNA) |
--   UG U   U     A            -   CA        UAGG        ----------U    UC   UUA        UCAACU     -    UUUUU       AG   UGU  U CUA UCAAC AGUGUUUUUUUU GUU  UUUUGGUA    UAAGCAUA           AUUU  CCU   UAUCUUGU      UUUUG ACAA     AGUUUAU  G   |||  | ||| ||||| |||||||||||| |||  ||||||||    ||||||||           ||||  |||   ||||||||      ||||| ||||     |||||||  A   ACA  G GAU AGUUG UUACAAAAGAAA CGG  AAAACCAU    GUUUGUAU           UAAG  GGA   AUAGAAUA      AGGAU UGUU     UUAGAUG  A AC   GU U   C     A            A   UG        --UA        UUUUAAAUAGU    UU   ---        ----UU     G    -UACU       AA |
Stem-loop sequence | UGUUGUUCUAUUCAACAAGUGUUUUUUUUGUUCAUUUUGGUAUAGGUAAGCAUAUAUUUUCCCUUUAUAUCUUGUUCAACUUUUUGACAAUUUUUAGUUUAUAGGAAAAGUAGAUUUCAUUUGUGUAGGAUUAUAAGAUAAGGUUGAAUUGAUAAAUUUUUAUGUUUGAUUACCAAAAGUGGCAAAAGAAAACAUUAGUUGACUAGUGUGACACA |