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BaseInfo

ncRNA ID novel_ath_miR872
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:4781141-4781277 [+]
Reference genome TAIR10
Source SRR1163720;SRR1164434
Length 24
Mature sequence(if miRNA) 114 - ACAAUGAUGUCUGAGUAGUGAAUA - 137
Stem-loop(if miRNA) --    G       -    -    UCUU  UUU   UU  U    UUCAUCU  UUAU  -CCUU  U  UA
  UUCA UAUUCAG CAUU UUGU    GA   UGU  AC GUUG       UG    CA     GC AU  C
  |||| ||||||| |||| ||||    ||   |||  || ||||       ||    ||     || ||
  AAGU AUGAGUC GUAG AACA    CU   GUA  UG CAAC       AC    GU     UG UG  U
AU    G       U    U    -UCU  --U   UU  -    UUAUCUU  UUUU  ACUAU  U  UC
Stem-loop sequence UUCAGUAUUCAGCAUUUUGUUCUUGAUUUUGUUUACUGUUGUUCAUCUUGUUAUCACCUUGCUAUUACUCUGUUGUUAUCAUGUUUUCAUUCUAUUCAACGUUUAUGUUCUCUACAAUGAUGUCUGAGUAGUGAAUA