ncRNA ID | novel_ath_miR866 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:752531-752623 [+] |
Reference genome | TAIR10 |
Source | SRR1163718 |
Length | 24 |
Mature sequence(if miRNA) | 70 - GGUGAGGUCUUGGGUUCGAGGAAC - 93 |
Stem-loop(if miRNA) |
--                            AU     -GGUA    UU   UCCUCGAACCCAAGACCUCACCCUUUAG  UAAUU     ACAG  U   ||||||||||||||||||||||||||||  |||||     ||||   AGGAGCUUGGGUUCUGGAGUGGGAAAUU  GUUGG     UGUC  G CA                            --     AAGGG    CU |
Stem-loop sequence | UCCUCGAACCCAAGACCUCACCCUUUAGAUUAAUUGGUAACAGUUUGUCCUGUGGGAAGGUUGUUAAAGGGUGAGGUCUUGGGUUCGAGGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_117514.4 |
|
2.5 | Arabidopsis thaliana hypothetical protein (XBAT34), mRNA | hypothetical protein(XBAT34) | coding protein | psRNATarget | |||||||||
NM_129859.2 |
|
3.0 | Arabidopsis thaliana Eukaryotic aspartyl protease family protein partial mRNA | Eukaryotic aspartyl protease family protein(AT2G42980) | coding protein | psRNATarget |