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BaseInfo

ncRNA ID novel_ath_miR866
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:752531-752623 [+]
Reference genome TAIR10
Source SRR1163718
Length 24
Mature sequence(if miRNA) 70 - GGUGAGGUCUUGGGUUCGAGGAAC - 93
Stem-loop(if miRNA) --                            AU     -GGUA    UU
  UCCUCGAACCCAAGACCUCACCCUUUAG  UAAUU     ACAG  U
  ||||||||||||||||||||||||||||  |||||     ||||
  AGGAGCUUGGGUUCUGGAGUGGGAAAUU  GUUGG     UGUC  G
CA                            --     AAGGG    CU
Stem-loop sequence UCCUCGAACCCAAGACCUCACCCUUUAGAUUAAUUGGUAACAGUUUGUCCUGUGGGAAGGUUGUUAAAGGGUGAGGUCUUGGGUUCGAGGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_117514.4
ncRNA:24   CAAGGAGCUUGGGUUCUGGAGUGG   1
  |||==|||||=|=|||||||||||
targets:1655   GUUUUUCGAAUCUAAGACCUCACC   1678

2.5 Arabidopsis thaliana hypothetical protein (XBAT34), mRNA hypothetical protein(XBAT34) coding protein psRNATarget
NM_129859.2
ncRNA:24   CAAGGAGCUUGGGUUCUGGAGUGG   1
  |*||=||*||=||||||||||||*
targets:480   GAUCUUCAAAUCCAAGACCUCACA   503

3.0 Arabidopsis thaliana Eukaryotic aspartyl protease family protein partial mRNA Eukaryotic aspartyl protease family protein(AT2G42980) coding protein psRNATarget