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BaseInfo

ncRNA ID novel_ath_miR865
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:1119252-1119295 [+]
Reference genome TAIR10
Source ERR1297311;ERR1297313
Length 21
Mature sequence(if miRNA) 1 - UUCAAUUGCAUUGAGGAGUGU - 21
Stem-loop(if miRNA) --     UU    --U      U
  UUCAA  GCAU   GAGGAG G
  |||||  ||||   |||||| U
  AGGUU  CGUG   CUUUUC A
GU     -U    UUU      A
Stem-loop sequence UUCAAUUGCAUUGAGGAGUGUAACUUUUCUUUGUGCUUUGGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
FJ708672.1
ncRNA:21   UGUGAGGAGUUACGUUAACUU   1
  *|||||||*||||||||||||
targets:1057   CCACUCCUAAAUGCAAUUGAA   1077

1.5 Arabidopsis thaliana leucine-rich repeat receptor-like protein kinase (LRR-RLK) mRNA, partial cds NA coding protein psRNATarget
AY059761.1
ncRNA:21   UGUGAGGAGUUACGUUAACUU   1
  *|||||||*||||||||||||
targets:1210   CCACUCCUAAAUGCAAUUGAA   1230

1.5 Arabidopsis thaliana At1g67720 mRNA sequence NA coding protein psRNATarget
NM_105440.2
ncRNA:21   UGUGAGGAGUUACGUUAACUU   1
  *|||||||*||||||||||||
targets:1420   CCACUCCUAAAUGCAAUUGAA   1440

1.5 Arabidopsis thaliana Leucine-rich repeat protein kinase family protein mRNA Leucine-rich repeat protein kinase family protein(AT1G67720) coding protein psRNATarget