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BaseInfo

ncRNA ID	novel_ath_miR862
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr4:1811763-1811837 [-]
Reference genome	TAIR10
Source	SRR1163718
Length	24
Mature sequence(if miRNA)	1 - AAUGGAGAAGACUCUGAAGCUGGC - 24
Stem-loop(if miRNA)	--     --            UC    UU UG  UG G G   UAGCU  GGAGUCUUCUUU  UUCC  G  CU  A U U   |||||  ||||||||||||  ||||  |  ||  | |   GUCGA  UCUCAGAAGAGG  AAGG  C  GA  U G C CG     AG            -U    -- GU  GU G U
Stem-loop sequence	UAGCUGGAGUCUUCUUUUCUUCCUUGUGCUUGAGUGUCUGGUUGAGUGCGGAAUGGAGAAGACUCUGAAGCUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:24   CGGUCGAAGUCUCAGAAGAGGUAA   1   |||||||||||||||||||||||| targets:397   GCCAGCUUCAGAGUCUUCUCCAUU   420 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   CGGUCGAAGUCUCAGAAGAGGUAA   1   ||=||||||||||||||||||||| targets:1137   GCUAGCUUCAGAGUCUUCUCCAUU   1160 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   CGGUCGAAGUCUCAGAAGAGGUAA   1   ||=||||||||||||||||||||| targets:1089   GCUAGCUUCAGAGUCUUCUCCAUU   1112 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   CGGUCGAAGUCUCAGAAGAGGUAA   1   ||=||||||||||||||||||||| targets:762   GCUAGCUUCAGAGUCUUCUCCAUU   785 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   CGGUCGAAGUCUCAGAAGAGGUAA   1   ||||||*||||||||||||||||| targets:742   GCCAGCYUCAGAGUCUUCUCCAUU   765 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget