ncRNA ID | novel_ath_miR858 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:10409163-10409333 [-] |
Reference genome | TAIR10 |
Source | SRR1163718 |
Length | 21 |
Mature sequence(if miRNA) | 151 - UUUGGAGUGCAGAAAUGAAUC - 171 |
Stem-loop(if miRNA) |
--U         A A         C  AA           AUCA  -AGA    U               C         --    A    UUGGAGUGC G AAUGAAUCA GA  GAUGAGUAAAG    AC    GCCA UGAGUUAUGGAACGA GAUGAUGAA  GGUA G    ||||||||| | ||||||||| ||  |||||||||||    ||    |||| ||||||||||||||| |||||||||  |||| C    AACCUCACG C UUACUUAGU CU  CUACUCAUUUC    UG    CGGU ACUUAAUACCUUGCU CUGCUACUU  UCAU U AUC         C C         A  AC           -GAA  GCCG    U               U         AA    C |
Stem-loop sequence | UUUGGAGUGCAGAAAUGAAUCACGAAAGAUGAGUAAAGAUCAACAGAGCCAUUGAGUUAUGGAACGACGAUGAUGAAGGUAAGCUCUACUAAUUCAUCGUCUUCGUUCCAUAAUUCAUUGGCGCCGGUAAGCUUUACUCAUCCAUCAUGAUUCAUUCCCGCACUCCAACUA |