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BaseInfo

ncRNA ID novel_ath_miR848
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:2999208-2999288 [+]
Reference genome TAIR10
Source SRR1163504;SRR1163720
Length 23
Mature sequence(if miRNA) 1 - GAUAUGAUUUUCGGUAGUGUAUA - 23
Stem-loop(if miRNA) ------   AUG     CG           CG  A  --A   U
      GAU   AUUUU  GUAGUGUAUAA  GU GG   AUG U
      |||   |||||  |||||||||||  || ||   ||| U
      CUA   UAAGG  UAUUACAUAUU  UA CC   UAC U
CAUUAA   --G     AU           AU  A  AAG   C
Stem-loop sequence GAUAUGAUUUUCGGUAGUGUAUAACGGUAGGAAUGUUUUCCAUGAACCAAUUAUUAUACAUUAUUAGGAAUGAUCAAUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_125808.3
ncRNA:23   AUAUGUGAUGGCUUUUAGUAUAG   1
  |||*||*|*|||||||||||||=
targets:1317   UAUUCAAUUCCGAAAAUCAUAUU   1339

3.0 Arabidopsis thaliana Peroxidase superfamily protein mRNA Peroxidase superfamily protein(AT5G64120) coding protein psRNATarget