ncRNA ID | novel_ath_miR848 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:2999208-2999288 [+] |
Reference genome | TAIR10 |
Source | SRR1163504;SRR1163720 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GAUAUGAUUUUCGGUAGUGUAUA - 23 |
Stem-loop(if miRNA) |
------   AUG     CG           CG  A  --A   U       GAU   AUUUU  GUAGUGUAUAA  GU GG   AUG U       |||   |||||  |||||||||||  || ||   ||| U       CUA   UAAGG  UAUUACAUAUU  UA CC   UAC U CAUUAA   --G     AU           AU  A  AAG   C |
Stem-loop sequence | GAUAUGAUUUUCGGUAGUGUAUAACGGUAGGAAUGUUUUCCAUGAACCAAUUAUUAUACAUUAUUAGGAAUGAUCAAUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_125808.3 |
|
3.0 | Arabidopsis thaliana Peroxidase superfamily protein mRNA | Peroxidase superfamily protein(AT5G64120) | coding protein | psRNATarget |