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BaseInfo

ncRNA ID novel_ath_miR842
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:15671560-15671700 [+]
Reference genome TAIR10
Source SRR1163504
Length 24
Mature sequence(if miRNA) 118 - CUUUGAUUGGAAGCGGUGAAGAGC - 141
Stem-loop(if miRNA) --       -  GC    --------     -U   UAC   --  UCUCCGUCUCAAAAAUUGUGAAACAAAAAA
  UCUUCAU GU  CCAA        GUUGA  GUG   UUU  GA                              C
  ||||||| ||  ||||        |||||  |||   |||  ||                              U
  AGAAGUG CG  GGUU        CAGCU  UAC   GAC  UU                              G
CG       G  AA    AGUUUCAG     UU   CAG   GU  UGCGUUUAACAUAACCAUUUUCACCGUUAU
Stem-loop sequence UCUUCAUGUGCCCAAGUUGAUGUGUACUUUGAUCUCCGUCUCAAAAAUUGUGAAACAAAAAACUGUAUUGCCACUUUUACCAAUACAAUUUGCGUUUUGCAGGACCAUUUUCGACGACUUUGAUUGGAAGCGGUGAAGAGC