ncRNA ID | novel_ath_miR842 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:15671560-15671700 [+] |
Reference genome | TAIR10 |
Source | SRR1163504 |
Length | 24 |
Mature sequence(if miRNA) | 118 - CUUUGAUUGGAAGCGGUGAAGAGC - 141 |
Stem-loop(if miRNA) |
--       -  GC    --------     -U   UAC   --  UCUCCGUCUCAAAAAUUGUGAAACAAAAAA   UCUUCAU GU  CCAA        GUUGA  GUG   UUU  GA                              C   ||||||| ||  ||||        |||||  |||   |||  ||                              U   AGAAGUG CG  GGUU        CAGCU  UAC   GAC  UU                              G CG       G  AA    AGUUUCAG     UU   CAG   GU  UGCGUUUAACAUAACCAUUUUCACCGUUAU |
Stem-loop sequence | UCUUCAUGUGCCCAAGUUGAUGUGUACUUUGAUCUCCGUCUCAAAAAUUGUGAAACAAAAAACUGUAUUGCCACUUUUACCAAUACAAUUUGCGUUUUGCAGGACCAUUUUCGACGACUUUGAUUGGAAGCGGUGAAGAGC |