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BaseInfo

ncRNA ID novel_ath_miR827
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:871756-871915 [+]
Reference genome TAIR10
Source ERR973027
Length 24
Mature sequence(if miRNA) 137 - CUUGUAAAUCUUUAAAACCCUUUU - 160
Stem-loop(if miRNA) --            A         U             -      AAAAUUU      A         -  AUCUUCUU UA
  AAGGGUUUUAAA GAUUUACAA GGAUUUUAAAAGG UUUUAA       UACAAG GUUUUUAAA GA        G  A
  |||||||||||| ||||||||| ||||||||||||| ||||||       |||||| ||||||||| ||        |
  UUCCCAAAAUUU CUAAAUGUU UCUAAAAUUUUCC AAAAUU       AUGUUC CAAAAAUUU CU        C  A
UU            -         C             C      -CUAUAC      C         U  AAAAAUUU UC
Stem-loop sequence AAGGGUUUUAAAAGAUUUACAAUGGAUUUUAAAAGGUUUUAAAAAAUUUUACAAGAGUUUUUAAAGAAUCUUCUUGUAAACUCUUUAAAAAUCUUUUAAAAACCCUUGUACAUAUCUUAAAACCCUUUUAAAAUCUCUUGUAAAUCUUUAAAACCCUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_114323.4
ncRNA:24   UUUUCCCAAAAUUU-CUAAAUGUUC   1
  ||||||||||||||-||||||||||
targets:2497   AAAAGGGUUUUAAAAGAUUUACAAG   2521

3.0 Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA fatty acid reductase 5(FAR5) coding protein psRNATarget