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BaseInfo

ncRNA ID novel_ath_miR814
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:13599871-13599964 [+]
Reference genome TAIR10
Source ERR973024
Length 24
Mature sequence(if miRNA) 71 - UGGAGAUAAUGGAGCAUUCUGGAG - 94
Stem-loop(if miRNA) --       CUA  UG      G    ---    UUU   -   UUUUU
  UUAGAGU   UU  UUAUUU UAAA   GUCU   AUA GUA     C
  |||||||   ||  |||||| ||||   ||||   ||| |||     A
  GGUCUUA   AG  AAUAGA GUUU   UAGA   UGU CAU     G
GA       -CG  GU      G    ACG    UUU   A   UUUUG
Stem-loop sequence UUAGAGUCUAUUUGUUAUUUGUAAAGUCUUUUAUAGUAUUUUUCAGGUUUUUACAUGUUUUAGAUGCAUUUGGAGAUAAUGGAGCAUUCUGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230088.1
ncRNA:24   GAGGUCUUACGAGGUAAUAGAGGU   1
  |||||||||||||=||||||||||
targets:1358   CUCCAGAAUGCUCUAUUAUCUCCA   1381

1.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-73-D14 NA coding protein psRNATarget