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BaseInfo

ncRNA ID	novel_ath_miR811
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:13661728-13661838 [+]
Reference genome	TAIR10
Source	ERR958577
Length	24
Mature sequence(if miRNA)	88 - AUUAAUUUAUAAAGGUUUUACUGU - 111
Stem-loop(if miRNA)	--  -       CUG             A  UUAAUUUAUCGAUAAAUUAAAACAUC   AG AAAAUCU   UAUAAAUUAAUAA UA                          U   || |||||||   ||||||||||||| ||   UC UUUUGGA   AUAUUUAAUUAUU CA                          A UG  A       --A             A  ACUCUGACGUUUUAAAAUAAUUAAAU
Stem-loop sequence	AGAAAAUCUCUGUAUAAAUUAAUAAAUAUUAAUUUAUCGAUAAAUUAAAACAUCUAUAAAUUAAUAAAAUUUUGCAGUCUCAACAUUAUUAAUUUAUAAAGGUUUUACUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_123183.6	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   ||||||||||||*||||||||||| targets:1608   ACAGUAAAACCUCUAUAAAUUAAU   1631 Target Full Sequence	1.5	Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein mRNA	alpha/beta-Hydrolases superfamily protein(AT5G38220)	coding protein	psRNATarget
NM_106581.3	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   ||||||||||||*||||||||||| targets:1524   ACAGUAAAACCUCUAUAAAUUAAU   1547 Target Full Sequence	1.5	Arabidopsis thaliana metacaspase 5 (MC5), mRNA	metacaspase 5(MC5)	coding protein	psRNATarget
NM_001203805.2	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   ||||||||||||*||||||||||| targets:63   ACAGUAAAACCUCUAUAAAUUAAU   86 Target Full Sequence	1.5	Arabidopsis thaliana HISTIDINE BIOSYNTHESIS 5B (HISN5B), mRNA	HISTIDINE BIOSYNTHESIS 5B(HISN5B)	coding protein	psRNATarget
NM_001343833.1	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   ||||||||||||*||||||||||| targets:1064   ACAGUAAAACCUCUAUAAAUUAAU   1087 Target Full Sequence	1.5	Arabidopsis thaliana Calcium-dependent lipid-binding (CaLB domain) family protein mRNA	Calcium-dependent lipid-binding (CaLB domain) family protein(AT5G23950)	coding protein	psRNATarget
NM_122300.4	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   ||||||||||||*||||||||||| targets:970   ACAGUAAAACCUCUAUAAAUUAAU   993 Target Full Sequence	1.5	Arabidopsis thaliana Calcium-dependent lipid-binding (CaLB domain) family protein mRNA	Calcium-dependent lipid-binding (CaLB domain) family protein(AT5G23950)	coding protein	psRNATarget
NM_124064.2	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   |||*||||||||*||||||||||| targets:692   ACAAUAAAACCUCUAUAAAUUAAU   715 Target Full Sequence	1.5	Arabidopsis thaliana Plant invertase/pectin methylesterase inhibitor superfamily protein mRNA	Plant invertase/pectin methylesterase inhibitor superfamily protein(AT5G46930)	coding protein	psRNATarget
NM_123045.4	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   |=|*||||||||*||||||||||| targets:5685   AUACUAAAACCUCUAUAAAUUAAU   5708 Target Full Sequence	1.5	Arabidopsis thaliana glucan synthase-like 9 (GSL09), partial mRNA	glucan synthase-like 9(GSL09)	coding protein	psRNATarget
NM_001344151.1	ncRNA:24   UGUCAUUUUGGAAAUAUUUAAUUA   1   |=|*||||||||*||||||||||| targets:5664   AUACUAAAACCUCUAUAAAUUAAU   5687 Target Full Sequence	1.5	Arabidopsis thaliana glucan synthase-like 9 (GSL09), mRNA	glucan synthase-like 9(GSL09)	coding protein	psRNATarget