Search result

BaseInfo

ncRNA ID	ath-miRf10516-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AUUGCAAACUUUGUGAGGGA - NA
Stem-loop(if miRNA)	U       AG    AAA   CU  -C    --C      A GUAAUUCCCUCGCAAA UUUGCAA  GAAU   UGU  CG  UAUU   ACUCGC A |||||||||||||||| |||||||  ||||   |||  ||  ||||   |||||| U CGUUGAGGGAGUGUUU AAACGUU  CUUA   ACG  GU  AUAA   UGAGCG U                 C       -A    --A   AU  AA    UAA      U
Stem-loop sequence	GUAAUUCCCUCGCAAAUUUUGCAAAGGAAUAAAUGUCUCGCUAUUCACUCGCAAUUUGCGAGUAAUAAUAAAUGUAGCAAAUUCAUUGCAAACUUUGUGAGGGAGUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY594693.1	ncRNA:20   AGGGAGUGUUUCAAACGUUA   1   ||=|||||||||||||||*| targets:88   UCUCUCACAAAGUUUGCAUU   107 Target Full Sequence	2.5	Arabidopsis thaliana UDP-glucuronic acid epimerase 1 (AtUglcAE1) mRNA, complete cds	NA	coding protein	psRNATarget
BT005652.1	ncRNA:20   AGGGAGUGUUUCAAACGUUA   1   ||=|||||||||||||||*| targets:88   UCUCUCACAAAGUUUGCAUU   107 Target Full Sequence	2.5	Arabidopsis thaliana clone U20808 putative nucleotide sugar epimerase (At2g45310) mRNA, complete cds	NA	coding protein	psRNATarget
BT004225.1	ncRNA:20   AGGGAGUGUUUCAAACGUUA   1   ||=|||||||||||||||*| targets:477   UCUCUCACAAAGUUUGCAUU   496 Target Full Sequence	2.5	Arabidopsis thaliana clone RAFL15-20-O03 (R20808) putative nucleotide sugar epimerase (At2g45310) mRNA, complete cds	NA	coding protein	psRNATarget
NM_130094.2	ncRNA:20   AGGGAGUGUUUCAAACGUUA   1   ||=|||||||||||||||*| targets:659   UCUCUCACAAAGUUUGCAUU   678 Target Full Sequence	2.5	Arabidopsis thaliana UDP-D-glucuronate 4-epimerase 4 (GAE4), mRNA	UDP-D-glucuronate 4-epimerase 4(GAE4)	coding protein	psRNATarget