ncRNA ID | ahy-miR167-5p |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGAAGCUGCCAGCAUGAUCUU - NA |
Stem-loop(if miRNA) |
GA      -A   - U  A  U           G        UAAC    -    UC UAU   UCAUGC  CCA C AC AG UGAAGCUGCCA CAUGAUCU    UUUC CCUC  C   G   ||||||  ||| | || || ||||||||||| ||||||||    |||| ||||  |   AGUACG  GGU G UG UC ACUUUGACGGU GUACUAGA    AGAG GGGG  G   A UA      AA   U U  A  C           -        --CU    U    UU UUU |
Stem-loop sequence | GAUCAUGCACCACUACAAGUUGAAGCUGCCAGCAUGAUCUUAACUUUCCCUCUCCUAUGAUUUGUUGGGGUGAGAUCAGAUCAUGUGGCAGUUUCACCUAGUUGUUGGAAGCAUGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR555230.1 |
|
0.0 | TSA: Arachis hypogaea Ahy.Unigene15023 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01017135.1 |
|
0.0 | TSA: Arachis hypogaea Unigene17143 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01005557.1 |
|
0.0 | TSA: Arachis hypogaea Unigene5562 mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |