Bioactive peptide information

BP0940

Name

Actinohivin

Organism

Actinomycete sp.

Family

Classification

Antimicrobial

UniProt ID

AHV_ACTSK

GO ID	GO Term	Definition	Evidence
GO:0030246	Molecular Function	carbohydrate binding	IEA
GO:0050688	Biological Process	regulation of defense response to virus	IEA

Modification

Length

114

Sequence

ASVTIRNAQT GRLLDSNYNG NVYTLPANGG NYQRWTGPGD GTVRNAQTGR CLDSNYDGAV YTLPCNGGSY
QKWLFYSNGY IQNVETGRVL DSNYNGNVYT LPANGGNYQK WYTG

Properties

View

Disulfide bond

Structure

PDB	Method	Resolution	Chain	Position
3A07	X-ray	1.19 A	A/B	1-114
4DEN	X-ray	1.60 A	A	1-114
4END	X-ray	1.90 A	A	1-114
4G1R	X-ray	1.57 A	A/C	1-114
4P6A	X-ray	1.40 A	A	1-114
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DSSP

Helix (H, G, I): 7.63%

Beta strand (B, E): 38.98%

Turn (S, T): 17.80%

Coil (C): 35.59%

1    SAQFASVTIR  NAQTGRLLDS  NYNGNVYTLP  ANGGNYQRWT  GPGDGTVRNA  QTGRCLDSNY
        EEEE EE  ETTT  EEEE   TT  EEEE       GGG EE  E SSS  EET  TT  EEEE T
61   DGAVYTLPCN  GGSYQKWLFY  SNGYIQNVET  GRVLDSNYNG  NVYTLPANGG  NYQKWYTG
     T BEEEE       GGG EEE   TTS EEETTT    EEEE TT    EEEE       GGG EEE

Pfam

Accession NO.	Identifier	Description
PF00652	Ricin_B_lectin	Ricin-type beta-trefoil lectin domain

SCOP

CATH

Class	Architecture	Topology	Homology
Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)