Search result

BaseInfo

ncRNA ID osa-miRf11648-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GAUGACUCAUCUAUGACGGGC - NA
Stem-loop(if miRNA)       ----        C                   U  UAUA
GUUAAU    GCCCGUCA AGAUGAGUCAUCUGUGACG GC    A
||||||    |||||||| ||||||||||||||||||| ||
UAAUUG    CGGGCAGU UCUACUCAGUAGACACUGC CG    U
      AUAU        A                   C  UAAU
Stem-loop sequence GUUAAUGCCCGUCACAGAUGAGUCAUCUGUGACGUGCUAUAAUUAAUGCCCGUCACAGAUGACUCAUCUAUGACGGGCUAUAGUUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107543.1
ncRNA:21   CGGGCAGUAUCUACUCAGUAG   1
  |=|||||||*|||||||||||
targets:1572   GUCCGUCAUUGAUGAGUCAUC   1592

1.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget
XM_015763577.1
ncRNA:21   CGGGCAGUAUCUACUCAGUAG   1
  *|||||||*||||||||||||
targets:1456   ACCCGUCACAGAUGAGUCAUC   1476

1.5 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605) coding protein psRNATarget
AK063612.1
ncRNA:21   CGGGCAGUAUCUACUCAGUAG   1
  *|=|||||*||||||||||||
targets:940   ACUCGUCAAAGAUGAGUCAUC   960

2.5 Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence NA coding protein psRNATarget