Search result

BaseInfo

ncRNA ID	osa-miRf11617-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UUUAGGCCCGAUUGAGAUGAG - NA
Stem-loop(if miRNA)	-GA      GUGA       U    UA      A UG   UC   A    UCUGUGACGGGCUCUAG AGAUGA   UCAUCU    CGGGCUU AGCU  GGCCCG U  AGG  AGC GUCA                 U ||||||   ||||||    ||||||| ||||  |||||| |  |||  ||| ||||                 U UCUACU   AGUAGA    GCCCGGA UUGA  UCGGGC A  UUC  ACU GACU                 U       AAG      GUUA       U    UA      - GU   -U   -    ACUGGAGUUAGUCUGGA
Stem-loop sequence	AGAUGAGAUCAUCUGUGACGGGCUUUAGCUUAGGCCCGAUUGAGGUCAGCAGUCAUCUGUGACGGGCUCUAGUUUAGGUCUGAUUGAGGUCAUCAGUCAUCUUUGACGGGCUAUAGUUUAGGCCCGAUUGAGAUGAGAAUCAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779200.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   *|=|||||||||||||||||| targets:46   GUUAUCUCAAUCGGGCCUAAA   66 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase IX.1-like (LOC107276703), mRNA	L-type lectin-domain containing receptor kinase IX.1-like(LOC107276703)	coding protein	psRNATarget
AK288447.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   *|||||||||||||||||||* targets:538   GUCAUCUCAAUCGGGCCUAAC   558 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence	NA	coding protein	psRNATarget
AK288447.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   =*=||||||||||||||*||| targets:335   UAUAUCUCAAUCGGGCCAAAA   355 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence	NA	coding protein	psRNATarget
XM_015788741.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   *||||||||||||||||*||| targets:655   GUCAUCUCAAUCGGGCCGAAA   675 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281457 (LOC107281457), mRNA	uncharacterized LOC107281457(LOC107281457)	coding protein	psRNATarget
AK107543.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   *|=|||||||||||*|||||| targets:1769   AUUAUCUCAAUCGGACCUAAA   1789 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
AK119390.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   *||||||||||||||||*||| targets:2886   GUCAUCUCAAUCGGGCCGAAA   2906 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence	NA	coding protein	psRNATarget
AK068923.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   *||||||||||||||||*||| targets:905   GUCAUCUCAAUCGGGCCGAAA   925 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence	NA	coding protein	psRNATarget
AK064906.1	ncRNA:21   GAGUAGAGUUAGCCCGGAUUU   1   *|=||||||||||||||*||| targets:2023   GUUAUCUCAAUCGGGCCAAAA   2043 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013000L21, full insert sequence	NA	coding protein	psRNATarget