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BaseInfo

ncRNA ID	osa-miRf11615-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - AACUGGAGCUAGAGCUGUGCC - NA
Stem-loop(if miRNA)	G   UG     C        AAAG  U CUGUU GGC  AGCUC AGCUCCAG    AG G ||||| |||  ||||| ||||||||    || G GACAA CCG  UCGAG UCGAGGUC    UC A      A   UG     A        AAGA  G
Stem-loop sequence	CUGUUGGGCUGAGCUCCAGCUCCAGAAAGAGUGGAGCUAGAACUGGAGCUAGAGCUGUGCCAAACAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015786448.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||||||||||||||||||*| targets:824   GGCACAGCUCUAGCUCCAGCU   844 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281192 (LOC107281192), transcript variant X5, mRNA	uncharacterized LOC107281192(Os06g0609001)	coding protein	psRNATarget
XM_015786446.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||||||||||||||||||*| targets:857   GGCACAGCUCUAGCUCCAGCU   877 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281192 (LOC107281192), transcript variant X3, mRNA	uncharacterized LOC107281192(Os06g0609001)	coding protein	psRNATarget
XM_015786447.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||||||||||||||||||*| targets:870   GGCACAGCUCUAGCUCCAGCU   890 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281192 (LOC107281192), transcript variant X4, mRNA	uncharacterized LOC107281192(Os06g0609001)	coding protein	psRNATarget
XM_015786444.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||||||||||||||||||*| targets:875   GGCACAGCUCUAGCUCCAGCU   895 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281192 (LOC107281192), transcript variant X1, mRNA	uncharacterized LOC107281192(Os06g0609001)	coding protein	psRNATarget
XM_015786445.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||||||||||||||||||*| targets:888   GGCACAGCUCUAGCUCCAGCU   908 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281192 (LOC107281192), transcript variant X2, mRNA	uncharacterized LOC107281192(Os06g0609001)	coding protein	psRNATarget
AK061289.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:780   GGCGCAGCUCCAGCUCCAGUU   800 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-301-A03, full insert sequence	NA	coding protein	psRNATarget
AK066899.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:807   GGCGCAGCUCCAGCUCCAGUU   827 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013091K05, full insert sequence	NA	coding protein	psRNATarget
EU847003.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:833   GGCGCAGCUCCAGCUCCAGUU   853 Target Full Sequence	2.5	Oryza sativa Japonica Group clone KCS173D03 40S ribosomal protein mRNA, complete cds	NA	coding protein	psRNATarget
AK104286.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:859   GGCGCAGCUCCAGCUCCAGUU   879 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-007-D06, full insert sequence	NA	coding protein	psRNATarget
HQ324810.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:846   GGCGCAGCUCCAGCUCCAGUU   866 Target Full Sequence	2.5	Oryza sativa Japonica Group clone KCS123A09 40S ribosomal protein mRNA, complete cds	NA	coding protein	psRNATarget
CT832423.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:873   GGCGCAGCUCCAGCUCCAGUU   893 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103L23, full insert sequence	NA	coding protein	psRNATarget
AK104620.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:859   GGCGCAGCUCCAGCUCCAGUU   879 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-309-F12, full insert sequence	NA	coding protein	psRNATarget
AK104842.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:859   GGCGCAGCUCCAGCUCCAGUU   879 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-042-F12, full insert sequence	NA	coding protein	psRNATarget
AK070905.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:869   GGCGCAGCUCCAGCUCCAGUU   889 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023065M10, full insert sequence	NA	coding protein	psRNATarget
XM_015775130.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||=||||||*|||||||||| targets:908   GGCGCAGCUCCAGCUCCAGUU   928 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 40S ribosomal protein SA (LOC9272225), mRNA	40S ribosomal protein SA(LOC9272225)	coding protein	psRNATarget
AK059695.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   |||||||=||||*|||||||| targets:194   GGCACAGUUCUAACUCCAGUU   214 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-032-B12, full insert sequence	NA	coding protein	psRNATarget
XM_015790454.1	ncRNA:21   CCGUGUCGAGAUCGAGGUCAA   1   *|*=||||||||||||||||* targets:253   CGAGCAGCUCUAGCUCCAGUC   273 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group translation initiation factor IF-2-like (LOC107281594), mRNA	translation initiation factor IF-2-like(LOC107281594)	coding protein	psRNATarget