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BaseInfo

ncRNA ID	osa-miRf11613-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CUUCUCCACCUCGAUCCUCGG - NA
Stem-loop(if miRNA)	A G   AG           CGA          --   - - CCAUAGCCCGAGCU CC C CUC  CUUCUCCACCU   UCCUCGGCGG  GCU C G              U || | |||  |||||||||||   ||||||||||  ||| | | GG G GAG  GGAGAGGUGGG   AGGAGCCGCC  CGC G C              C   A -   CA           ---          GC   C C GUCGUCGCCGCGAA
Stem-loop sequence	CCACGCUCAGCUUCUCCACCUCGAUCCUCGGCGGGCUCGCCAUAGCCCGAGCUUCAAGCGCCGCUGCUGCCGCCGCCGCCGCCGAGGAGGGUGGAGAGGACGAGGAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015759487.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   ||||||||||||||||||||| targets:143   CCGAGGAUCGAGGUGGAGAAG   163 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group probable prefoldin subunit 5 (LOC4348957), mRNA	probable prefoldin subunit 5(LOC4348957)	coding protein	psRNATarget
AK064048.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   ||||||||||||||||||||| targets:118   CCGAGGAUCGAGGUGGAGAAG   138 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:001-125-D11, full insert sequence	NA	coding protein	psRNATarget
XM_015772683.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   |||||||*||||||||||=|| targets:460   CCGAGGAACGAGGUGGAGGAG   480 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable protein phosphatase 2C 32 (LOC4332509), mRNA	probable protein phosphatase 2C 32(LOC4332509)	coding protein	psRNATarget
AK287695.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   |||||||*||||||||||=|| targets:467   CCGAGGAACGAGGUGGAGGAG   487 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065129B08, full insert sequence	NA	coding protein	psRNATarget
XM_015779915.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   |=||||||||||*|||||||| targets:239   CUGAGGAUCGAGUUGGAGAAG   259 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280735 (LOC107280735), mRNA	uncharacterized LOC107280735(LOC107280735)	coding protein	psRNATarget
XM_015758266.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   *|||||*||||||||||||=| targets:1010   ACGAGGUUCGAGGUGGAGAGG   1030 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4349271 (LOC4349271), mRNA	uncharacterized LOC4349271(LOC4349271)	coding protein	psRNATarget
AK063669.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   *|||||*||||||||||||=| targets:894   ACGAGGUUCGAGGUGGAGAGG   914 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-119-D04, full insert sequence	NA	coding protein	psRNATarget
AK066674.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   |||=**||||||||||||||| targets:3469   CCGGCCAUCGAGGUGGAGAAG   3489 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013073O22, full insert sequence	NA	coding protein	psRNATarget
XM_015793846.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   |||=**||||||||||||||| targets:1273   CCGGCCAUCGAGGUGGAGAAG   1293 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345980 (LOC4345980), mRNA	uncharacterized LOC4345980(LOC4345980)	coding protein	psRNATarget
XM_015780074.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   *|||||*|||*|||||||||| targets:237   GCGAGGUUCGUGGUGGAGAAG   257 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group vacuolar-sorting receptor 7 (LOC4336957), transcript variant X1, mRNA	vacuolar-sorting receptor 7(LOC4336957)	coding protein	psRNATarget
XM_015780075.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   *|||||*|||*|||||||||| targets:239   GCGAGGUUCGUGGUGGAGAAG   259 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group vacuolar-sorting receptor 7 (LOC4336957), transcript variant X3, mRNA	vacuolar-sorting receptor 7(LOC4336957)	coding protein	psRNATarget
AK105614.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   *|||||*|||*|||||||||| targets:164   GCGAGGUUCGUGGUGGAGAAG   184 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-200-B09, full insert sequence	NA	coding protein	psRNATarget
AK069344.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   *|||||*|||*|||||||||| targets:113   GCGAGGUUCGUGGUGGAGAAG   133 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023010O14, full insert sequence	NA	coding protein	psRNATarget
XM_015755972.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   *||||*||||||||||*|||| targets:382   GCGAGCAUCGAGGUGGCGAAG   402 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group AT-hook motif nuclear-localized protein 17-like (LOC107277367), mRNA	AT-hook motif nuclear-localized protein 17-like(LOC107277367)	coding protein	psRNATarget
XM_015760080.1	ncRNA:21   GGCUCCUAGCUCCACCUCUUC   1   ==|*||||*|||||||||||| targets:235   UUGCGGAUGGAGGUGGAGAAG   255 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group GTPase HflX (LOC4350828), mRNA	GTPase HflX(LOC4350828)	coding protein	psRNATarget