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BaseInfo

ncRNA ID	novel_zma_miR8023
Species	Zea mays
Class	miRNA
Genome position	Chr10:71471355-71471483 [+]
Reference genome	RefGen_v4
Source	SRR3385651
Length	22
Mature sequence(if miRNA)	1 - GGUUUUUCCUGUGUAGAACCCU - 22
Stem-loop(if miRNA)	--                 A                                        A      GGUUUUUCCUGUGUAGA CCCUAUAUUUCGAUUUGAGGCAUUAGUUUGAGGCAUUGUU GAGC   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||A   CCAAAAAGGACACAUCU GGGAUAUAAAGCUAAACUCCGUAAUCAAACUCCGUAACAA CUCU CA                 C                                        C
Stem-loop sequence	GGUUUUUCCUGUGUAGAACCCUAUAUUUCGAUUUGAGGCAUUAGUUUGAGGCAUUGUUAGAGCAUCUCCAACAAUGCCUCAAACUAAUGCCUCAAAUCGAAAUAUAGGGCUCUACACAGGAAAAACCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY106673.1	ncRNA:22   UCCCAAGAUGUGUCCUUUUUGG   1   ||||*||||||||||||||||| targets:1346   AGGGCUCUACACAGGAAAAACC   1367 Target Full Sequence	1.0	Zea mays PCO111223 mRNA sequence	NA	coding protein	psRNATarget
HI402948.1	ncRNA:22   UCCCAAGAUGUGUCCUUUUUGG   1   ||||*|=||||||||||||||| targets:1   AGGGCUUUACACAGGAAAAACC   22 Target Full Sequence	2.0	Sequence 1073 from Patent EP2074227	NA	coding protein	psRNATarget
JB163409.1	ncRNA:22   UCCCAAGAUGUGUCCUUUUUGG   1   ||||*|=||||||||||||||| targets:1   AGGGCUUUACACAGGAAAAACC   22 Target Full Sequence	2.0	Sequence 1073 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235078.1	ncRNA:22   UCCCAAGAUGUGUCCUUUUUGG   1   ||||*|=||||||||||||||| targets:1   AGGGCUUUACACAGGAAAAACC   22 Target Full Sequence	2.0	Sequence 1073 from Patent EP2985353	NA	coding protein	psRNATarget
BT061162.2	ncRNA:22   UCCCAAGAUGUGUCCUUUUUGG   1   =|||*||||||||||||||||= targets:1513   GGGGCUCUACACAGGAAAAACU   1534 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0117D02 mRNA, complete cds	NA	coding protein	psRNATarget
EU952101.1	ncRNA:22   UCCCAAGAUGUGUCCUUUUUGG   1   =*||*||||||||||||||||= targets:70   GAGGCUCUACACAGGAAAAACU   91 Target Full Sequence	2.0	Zea mays clone 1164740 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget