ncRNA ID | novel_zma_miR8004 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:172454782-172454955 [+] |
Reference genome | RefGen_v4 |
Source | SRR3385575 |
Length | 18 |
Mature sequence(if miRNA) | 157 - UGUUGGUGAGAUCAGAUA - 174 |
Stem-loop(if miRNA) |
--  C             -GU    G   GA       GCUGA G   A    AUCCA       AGAA        UC   -AU    U   UC GAUCUCACCAGCA   UUCA UAG  UAGGUUA     U CUC AGGA     GGUGAGU    AUAUCAAU  CGG   UACC U   || |||||||||||||   |||| |||  |||||||     | ||| ||||     |||||||    ||||||||  |||   |||| U   AG CUAGAGUGGUUGU   GAGU AUC  AUCUAGU     A GAG UCUU     UUACUCG    UGUAGUUG  GUU   GUGG G AU  A             AAC    -   AA       ----A G   G    AAUAG       GCCG        GA   GGU    U |
Stem-loop sequence | UCCGAUCUCACCAGCAGUUUCAGUAGGAUAGGUUAGCUGAUGCUCAAGGAAUCCAGGUGAGUAGAAAUAUCAAUUCCGGAUUACCUUUGUGGUGUGGUUGAGGUUGAUGUGCCGGCUCAUUGAUAAUUCUGGAGGAAUGAUCUAAACUAUGAGCAAUGUUGGUGAGAUCAGAUA |