ncRNA ID | novel_zma_miR7986 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:111791259-111791380 [-] |
Reference genome | RefGen_v4 |
Source | SRR3385575 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GGCAAGUUGUCCUUGGCUAC - 20 |
Stem-loop(if miRNA) |
--         UG          UAUUUU A    -     U  CAG   AG  --UA G   U   AGCCAAGGA  ACUUGCCGGG      G GCAU GCAUG UA   GGG  CA    U CAA C   |||||||||  ||||||||||      | |||| ||||| ||   |||  ||    | ||| U   UCGGUUCCU  UGAACGGCCU      C CGUG CGUGC AU   CCC  GU    A GUU G CA         GU          -UCUGU -    G     C  --A   GA  UUUA G   U |
Stem-loop sequence | AGCCAAGGAUGACUUGCCGGGUAUUUUGAGCAUGCAUGUUACAGGGGAGCAUAUGCAAUCUGUUUGGAAUUUUGAGCCCAUACCGUGCGGUGCCUGUCUUCCGGCAAGUUGUCCUUGGCUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020548143.1 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC103648407 (LOC103648407), mRNA | NA | coding protein | psRNATarget | |||||||||
BT060668.2 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0031E01 mRNA, complete cds | NA | coding protein | psRNATarget |