ncRNA ID | novel_vvi_miR304 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:15108773-15108835 [-] |
Reference genome | 12X |
Source | SRR1528351;SRR1528357;SRR1528372;SRR1528386;SRR1528387;SRR1528416;SRR1528417 |
Length | 24 |
Mature sequence(if miRNA) | 40 - UGUGGCUAGCGUGGGCUUUGAACU - 63 |
Stem-loop(if miRNA) |
--U    C          U          AA    GUGG UAGCGUGGGC UUGAACUAAU  A    |||| |||||||||| ||||||||||  A    UACC GUCGCACUCG AACUUGAUUA  A CUU    A          U          AA |
Stem-loop sequence | UGUGGCUAGCGUGGGCUUUGAACUAAUAAAAAAAAUUAGUUCAAUGCUCACGCUGACCAUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA139114.1 |
|
2.5 | TSA: Vitis vinifera Locus_5042_Transcript_7/9_Confidence_0.394.Vivi mRNA sequence | NA | coding protein | psRNATarget |