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BaseInfo

ncRNA ID novel_vvi_miR301
Species Vitis vinifera
Class miRNA
Genome position Chr13:2239197-2239400 [-]
Reference genome 12X
Source SRR1528351
Length 19
Mature sequence(if miRNA) 1 - UCCGGAUGUGAGACAUCUG - 19
Stem-loop(if miRNA) --A    GAG         UGGAA    GAA   UG   --GG  AGAAU         GAG         ---UG -AG  G     -GAGAAGAAU        U
   AUGU   AUAUCUGGG     UGUU   UGU  GCG    GC     UCCGGGUGU   ACAUCCGGG     G   UG CGGCG          UUCGGAUG G
   ||||   |||||||||     ||||   |||  |||    ||     |||||||||   |||||||||     |   || |||||          |||||||| A
   UACA   UGUAGGCCU     ACGG   GCG  UGC    UG     AGGCCUACA   UGUAGGCCU     C   AC GUUGC          AGGCCUAC G
GUC    GAG         -UAAG    --G   GU   AAGA  -GAAU         GAG         UAAGA GGG  A     AAGAUGAAAU        A
Stem-loop sequence AAUGUGAGAUAUCUGGGUGGAAUGUUGAAUGUUGGCGGGGCAGAAUUCCGGGUGUGAGACAUCCGGGUGGAGUGGCGGCGGAGAAGAAUUUCGGAUGUGAGACAUCCGGAUAAAGUAGAACGUUGACAGGGCAGAAUUCCGGAUGUGAGACAUCCGGAUAAGGUAGAACGUUGGCGGGGCAGAAUUCCGGAUGUGAGACAUCUG