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BaseInfo

ncRNA ID novel_vvi_miR299
Species Vitis vinifera
Class miRNA
Genome position Chr12:7043279-7043337 [+]
Reference genome 12X
Source SRR1528351
Length 24
Mature sequence(if miRNA) 36 - GUUCAUUUUAGCUAUGUUGGAUGA - 59
Stem-loop(if miRNA) --          A     C     CUA   A
  AUCCAACAUA UUAAA UGAAC   UUG U
  |||||||||| ||||| |||||   |||
  UAGGUUGUAU GAUUU ACUUG   AAC A
AG          C     U     ---   A
Stem-loop sequence AUCCAACAUAAUUAAACUGAACCUAUUGAUAACAAGUUCAUUUUAGCUAUGUUGGAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA161886.1
ncRNA:24   AGUAGGUUGUAUCGAUUUUACUUG   1
  |||||||||=||||||||||||||
targets:227   UCAUCCAACGUAGCUAAAAUGAAC   250

1.0 TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence NA coding protein psRNATarget