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BaseInfo

ncRNA ID novel_vvi_miR283
Species Vitis vinifera
Class miRNA
Genome position Chr4:14364770-14364824 [-]
Reference genome 12X
Source SRR1528351
Length 24
Mature sequence(if miRNA) 32 - AAAGCGUAGGAAGGUGUGGAGAGC - 55
Stem-loop(if miRNA) --   G   -A    G          CU
  AAA CGU  GGAA GUGUGGAGAG  G
  ||| |||  |||| ||||||||||
  UUU GCA  UUUU UACAUUUCUC  C
GG   G   GG    A          CU
Stem-loop sequence AAAGCGUAGGAAGGUGUGGAGAGCUGCUCCUCUUUACAUAUUUUGGACGGUUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA147482.1
ncRNA:24   CGAGAGGUGUGGAAGGAUGCGAAA   1
  ||*=|||||||||||||||||||*
targets:956   GCGUUCCACACCUUCCUACGCUUC   979

1.0 TSA: Vitis vinifera Locus_9212_Transcript_1/4_Confidence_0.800.Vivi mRNA sequence NA coding protein psRNATarget