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BaseInfo

ncRNA ID novel_vvi_miR269
Species Vitis vinifera
Class miRNA
Genome position Chr16:5436028-5436215 [-]
Reference genome 12X
Source SRR1528351
Length 23
Mature sequence(if miRNA) 1 - UGGGUUCAAAGUAGACAAUAUUU - 23
Stem-loop(if miRNA) --              A GU   C     C    AA U       AU    ----   --A    C   U    CAUC        UA    GA    A
  AUAUUGUCUGCUUU G  CCA UAGCC UCAC  C UUAAAAU  GUCU    ACA   AUAC AGA GAGU    CCUUAUAA  GUGU  AAGA A
  |||||||||||||| |  ||| ||||| ||||  | |||||||  ||||    |||   |||| ||| ||||    ||||||||  ||||  ||||
  UAUAACAGAUGAAA U  GGU AUCGG AGUG  G AAUUUUG  UAGA    UGU   UAUG UCU CUCA    GGAAUAUU  UACA  UUCU G
UU              C UG   A     A    CG U       CG    UUGA   GCG    A   U    -ACA        --    -G    C
Stem-loop sequence AUAUUGUCUGCUUUAGGUCCACUAGCCCUCACAACUUUAAAAUAUGUCUACAAAUACCAGAUGAGUCAUCCCUUAUAAUAGUGUGAAAGAAAGCUCUUGACAUUUAUAAGGACAACUCUUCUAGUAUGCGUGUAGUUAGAUGCGUUUUAAUGGCGUGAAGGCUAAUGGGUUCAAAGUAGACAAUAUUU