ncRNA ID | novel_vvi_miR269 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:5436028-5436215 [-] |
Reference genome | 12X |
Source | SRR1528351 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UGGGUUCAAAGUAGACAAUAUUU - 23 |
Stem-loop(if miRNA) |
--              A GU   C     C    AA U       AU    ----   --A    C   U    CAUC        UA    GA    A   AUAUUGUCUGCUUU G  CCA UAGCC UCAC  C UUAAAAU  GUCU    ACA   AUAC AGA GAGU    CCUUAUAA  GUGU  AAGA A   |||||||||||||| |  ||| ||||| ||||  | |||||||  ||||    |||   |||| ||| ||||    ||||||||  ||||  ||||   UAUAACAGAUGAAA U  GGU AUCGG AGUG  G AAUUUUG  UAGA    UGU   UAUG UCU CUCA    GGAAUAUU  UACA  UUCU G UU              C UG   A     A    CG U       CG    UUGA   GCG    A   U    -ACA        --    -G    C |
Stem-loop sequence | AUAUUGUCUGCUUUAGGUCCACUAGCCCUCACAACUUUAAAAUAUGUCUACAAAUACCAGAUGAGUCAUCCCUUAUAAUAGUGUGAAAGAAAGCUCUUGACAUUUAUAAGGACAACUCUUCUAGUAUGCGUGUAGUUAGAUGCGUUUUAAUGGCGUGAAGGCUAAUGGGUUCAAAGUAGACAAUAUUU |