ncRNA ID | novel_vvi_miR259 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:23579001-23579080 [+] |
Reference genome | 12X |
Source | SRR1528351;SRR1528363;SRR1528383;SRR1528392;SRR1528404;SRR1528406;SRR1528408;SRR1528417 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUAGAGGAGAGUGGAUGUAGGCC - 24 |
Stem-loop(if miRNA) |
---GU   A      U          CG  UUGCGCCGAAC      UAG GGAGAG GGAUGUAGGC  GG           C      ||| |||||| ||||||||||  ||           A      AUC CUUCUC CUUACGUUUG  UG           C UUCUC   C      U          --  UUCUCAAAUAU |
Stem-loop sequence | GUUAGAGGAGAGUGGAUGUAGGCCGGGUUGCGCCGAACCACUAUAAACUCUUGUGUUUGCAUUCUCUCUUCCCUACUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA157323.1 |
|
1.5 | TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |