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BaseInfo

ncRNA ID	novel_vvi_miR258
Species	Vitis vinifera
Class	miRNA
Genome position	Chr14:19040505-19040550 [+]
Reference genome	12X
Source	SRR1528351
Length	21
Mature sequence(if miRNA)	1 - UAGGGUUAGAAGAAUGAAGCC - 21
Stem-loop(if miRNA)	--UA     --       U          GGGUU  AGAAGAA GAAGCC     |||||  ||||||| |||||U     UUCAA  UUUUCUU UUUCGU GUUG     CU       -
Stem-loop sequence	UAGGGUUAGAAGAAUGAAGCCUUGCUUUUUCUUUUUCAACUUGUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA169721.1	ncRNA:21   CCGAAGUAAGAAGAUUGGGAU   1   **|||||||||||*||||||| targets:23   CUCUUCAUUCUUCAAACCCUA   43 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_9098_Transcript_2/3_Confidence_0.667.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA169720.1	ncRNA:21   CCGAAGUAAGAAGAUUGGGAU   1   **|||||||||||*||||||| targets:23   CUCUUCAUUCUUCAAACCCUA   43 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_9098_Transcript_3/3_Confidence_0.667.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019221878.1	ncRNA:21   CCGAAGUAAGAAGAUUGGGAU   1   **|||||||||||*||||||| targets:106   CUCUUCAUUCUUCAAACCCUA   126 Target Full Sequence	1.5	PREDICTED: Vitis vinifera F-box/LRR-repeat protein 3 (LOC100258428), mRNA	NA	coding protein	psRNATarget
KA144419.1	ncRNA:21   CCGAAGUAAGAAGAUUGGGAU   1   ||||||||||||=|||||||* targets:937   GGCUUCAUUCUUUUAACCCUU   957 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_927_Transcript_7/7_Confidence_0.533.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002283908.4	ncRNA:21   CCGAAGUAAGAAGAUUGGGAU   1   ||||||||||||=|||||||* targets:992   GGCUUCAUUCUUUUAACCCUU   1012 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC100253235 (LOC100253235), mRNA	NA	coding protein	psRNATarget