Search result

BaseInfo

ncRNA ID	novel_vvi_miR257
Species	Vitis vinifera
Class	miRNA
Genome position	Chr14:11426625-11426858 [+]
Reference genome	12X
Source	SRR1528351
Length	24
Mature sequence(if miRNA)	1 - CUCCCUAGGAUUCGAACUCAAGUC - 24
Stem-loop(if miRNA)	--                                                                UGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN   CUCCCUAGGAUUCGAACUCAAGUCCAAGCCUUAAGGAUGUUGAGGAAGCCCUCCUGGUACCAUC                                                   N   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   GAGGGAUCCUAAGCUUGAGUUCAGGUUCGGAAUUCCUGCAACUCCUUCGGGAGGACCAUGGUAG                                                   N CG                                                                UCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Stem-loop sequence	CUCCCUAGGAUUCGAACUCAAGUCCAAGCCUUAAGGAUGUUGAGGAAGCCCUCCUGGUACCAUCUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUGAUGGUACCAGGAGGGCUUCCUCAACGUCCUUAAGGCUUGGACUUGAGUUCGAAUCCUAGGGAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010665591.2	ncRNA:24   CUGAACUCAAGCUUAGGAUCCCUC   1   ||||||=|||||||||||=||||| targets:3170   GACUUGGGUUCGAAUCCUGGGGAG   3193 Target Full Sequence	2.5	PREDICTED: Vitis vinifera MDIS1-interacting receptor like kinase 2-like (LOC100255980), mRNA	NA	coding protein	psRNATarget