Search result

BaseInfo

ncRNA ID	novel_vvi_miR252
Species	Vitis vinifera
Class	miRNA
Genome position	Chr14:11426620-11426853 [-]
Reference genome	12X
Source	SRR1528351
Length	24
Mature sequence(if miRNA)	211 - CUCCCUAGGAUUCGAACUCAAGUC - 234
Stem-loop(if miRNA)	--                                     C                          AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN   CUCCCUAGGAUUCGAACUCAAGUCCAAGCCUUAAGGA GUUGAGGAAGCCCUCCUGGUACCAUC                                                   N   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   GAGGGAUCCUAAGCUUGAGUUCAGGUUCGGAAUUCCU CAACUCCUUCGGGAGGACCAUGGUAG                                                   N CG                                     A                          ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Stem-loop sequence	CUCCCUAGGAUUCGAACUCAAGUCCAAGCCUUAAGGACGUUGAGGAAGCCCUCCUGGUACCAUCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAUGGUACCAGGAGGGCUUCCUCAACAUCCUUAAGGCUUGGACUUGAGUUCGAAUCCUAGGGAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010665591.2	ncRNA:24   CUGAACUCAAGCUUAGGAUCCCUC   1   ||||||=|||||||||||=||||| targets:3170   GACUUGGGUUCGAAUCCUGGGGAG   3193 Target Full Sequence	2.5	PREDICTED: Vitis vinifera MDIS1-interacting receptor like kinase 2-like (LOC100255980), mRNA	NA	coding protein	psRNATarget