ncRNA ID | novel_vvi_miR246 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:2765935-2765987 [-] |
Reference genome | 12X |
Source | SRR1528350;SRR1528351;SRR1528356;SRR1528357;SRR1528362;SRR1528364;SRR1528371;SRR1528379;SRR1528389;SRR1528406;SRR1528407 |
Length | 25 |
Mature sequence(if miRNA) | 29 - UAUAAUGAUGUUGAUUCUGAAUACU - 53 |
Stem-loop(if miRNA) |
--        -       UCU     C   UAUAAUGA UGUUGAU   GAAUA U   |||||||| |||||||   |||||   AUGUUAUU ACGACUG   UUUGU G UA        U       UCC     G |
Stem-loop sequence | UAUAAUGAUGUUGAUUCUGAAUACUGGUGUUUCCUGUCAGCAUUUAUUGUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA160568.1 |
|
0.0 | TSA: Vitis vinifera Locus_8026_Transcript_8/11_Confidence_0.214.Vivi mRNA sequence | NA | coding protein | psRNATarget |