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BaseInfo

ncRNA ID novel_vvi_miR246
Species Vitis vinifera
Class miRNA
Genome position Chr4:2765935-2765987 [-]
Reference genome 12X
Source SRR1528350;SRR1528351;SRR1528356;SRR1528357;SRR1528362;SRR1528364;SRR1528371;SRR1528379;SRR1528389;SRR1528406;SRR1528407
Length 25
Mature sequence(if miRNA) 29 - UAUAAUGAUGUUGAUUCUGAAUACU - 53
Stem-loop(if miRNA) --        -       UCU     C
  UAUAAUGA UGUUGAU   GAAUA U
  |||||||| |||||||   |||||
  AUGUUAUU ACGACUG   UUUGU G
UA        U       UCC     G
Stem-loop sequence UAUAAUGAUGUUGAUUCUGAAUACUGGUGUUUCCUGUCAGCAUUUAUUGUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA160568.1
ncRNA:25   UCAUAAGUCUUAGUUGUAGUAAUAU   1
  |||||||||||||||||||||||||
targets:267   AGUAUUCAGAAUCAACAUCAUUAUA   291

0.0 TSA: Vitis vinifera Locus_8026_Transcript_8/11_Confidence_0.214.Vivi mRNA sequence NA coding protein psRNATarget