ncRNA ID | novel_vvi_miR245 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:12715137-12715274 [-] |
Reference genome | 12X |
Source | SRR1048204 |
Length | 24 |
Mature sequence(if miRNA) | 115 - AGGGUCUUUAAUAUGUUAAUUGGG - 138 |
Stem-loop(if miRNA) |
--    U  -U        UA      UUAAAA      AAC            -     -UAAAAG     A   AGGG CU  UAAUAUGU  AUUGGG      GGUGAU   UACUACUCAAAA GUGUU       AGUUU U   |||| ||  ||||||||  ||||||      ||||||   |||||||||||| |||||       ||||| U   UCCC GA  GUUAUACA  UAACCC      UCACUA   AUGAUGAGUUUU CAUGA       UCGGA A AU    U  UC        GC      ---UCC      ---            U     UAAAGUA     C |
Stem-loop sequence | AGGGUCUUUAAUAUGUUAAUUGGGUUAAAAGGUGAUAACUACUACUCAAAAGUGUUUAAAAGAGUUUAUUACAGGCUAUGAAAUAGUACUUUUUGAGUAGUAAUCACUCCUCCCAAUCGACAUAUUGCUAGUCCCUUA |