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BaseInfo

ncRNA ID novel_vvi_miR245
Species Vitis vinifera
Class miRNA
Genome position Chr12:12715137-12715274 [-]
Reference genome 12X
Source SRR1048204
Length 24
Mature sequence(if miRNA) 115 - AGGGUCUUUAAUAUGUUAAUUGGG - 138
Stem-loop(if miRNA) --    U  -U        UA      UUAAAA      AAC            -     -UAAAAG     A
  AGGG CU  UAAUAUGU  AUUGGG      GGUGAU   UACUACUCAAAA GUGUU       AGUUU U
  |||| ||  ||||||||  ||||||      ||||||   |||||||||||| |||||       ||||| U
  UCCC GA  GUUAUACA  UAACCC      UCACUA   AUGAUGAGUUUU CAUGA       UCGGA A
AU    U  UC        GC      ---UCC      ---            U     UAAAGUA     C
Stem-loop sequence AGGGUCUUUAAUAUGUUAAUUGGGUUAAAAGGUGAUAACUACUACUCAAAAGUGUUUAAAAGAGUUUAUUACAGGCUAUGAAAUAGUACUUUUUGAGUAGUAAUCACUCCUCCCAAUCGACAUAUUGCUAGUCCCUUA