ncRNA ID | novel_vvi_miR242 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr3:3951674-3951744 [-] |
Reference genome | 12X |
Source | SRR1528350 |
Length | 23 |
Mature sequence(if miRNA) | 49 - GAGGAGAGUGGACGUAGGCAAAG - 71 |
Stem-loop(if miRNA) |
--        U   C  A    AAGAAGUGCCGAAC   GAGGAGAG GGA GU GGCA              U   |||||||| ||| || ||||              A   CUCUUCUC UCU CA GUUU              C AU        -   -  C    GUGCUCUCAAAUAU |
Stem-loop sequence | GAGGAGAGUGGACGUAGGCAAAGAAGUGCCGAACUACUAUAAACUCUCGUGUUUGCACUCUCUCUUCUCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA157323.1 |
|
1.5 | TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |