ncRNA ID | novel_vvi_miR235 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:2337541-2337609 [+] |
Reference genome | 12X |
Source | SRR1528350 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GAGGAGAGUGGACGUAGGCAAAG - 23 |
Stem-loop(if miRNA) |
--        U GAC        -   ------    CC   GAGGAGAG G   GUAGGCAA AGA      AGUG  G   |||||||| |   |||||||| |||      ||||   CUUCUCUC C   CGUUUGUU UCU      UCAC  A CC        U --A        C   CAAAUA    CA |
Stem-loop sequence | GAGGAGAGUGGACGUAGGCAAAGAAGUGCCGAACCACUAUAAACUCUCUUGUUUGCACUCUCUCUUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA157323.1 |
|
1.5 | TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |