ncRNA ID | novel_vvi_miR230 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr9:6258961-6259008 [-] |
Reference genome | 12X |
Source | SRR1528350;SRR1528358;SRR1528360;SRR1528362;SRR1528363;SRR1528379;SRR1528380;SRR1528381;SRR1528391;SRR1528402;SRR1528406;SRR1528407;SRR1528416 |
Length | 20 |
Mature sequence(if miRNA) | 29 - AAAGAUGGUGAACUAUGCCU - 48 |
Stem-loop(if miRNA) |
---A       UGAA      CUUA     AAGAUGG    CUAUGC    A     |||||||    ||||||     UUCUAUC    GAUACG    A ACUA       -UUA      UCUA |
Stem-loop sequence | AAAGAUGGUGAACUAUGCCUUAAAAUCUGCAUAGAUUCUAUCUUAUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002279293.4 |
|
2.5 | PREDICTED: Vitis vinifera Golgi transport complex-related-like (LOC100247220), mRNA | NA | coding protein | psRNATarget |