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BaseInfo

ncRNA ID novel_vvi_miR230
Species Vitis vinifera
Class miRNA
Genome position Chr9:6258961-6259008 [-]
Reference genome 12X
Source SRR1528350;SRR1528358;SRR1528360;SRR1528362;SRR1528363;SRR1528379;SRR1528380;SRR1528381;SRR1528391;SRR1528402;SRR1528406;SRR1528407;SRR1528416
Length 20
Mature sequence(if miRNA) 29 - AAAGAUGGUGAACUAUGCCU - 48
Stem-loop(if miRNA) ---A       UGAA      CUUA
    AAGAUGG    CUAUGC    A
    |||||||    ||||||
    UUCUAUC    GAUACG    A
ACUA       -UUA      UCUA
Stem-loop sequence AAAGAUGGUGAACUAUGCCUUAAAAUCUGCAUAGAUUCUAUCUUAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002279293.4
ncRNA:20   UCCGUAUCAAGUGGUAGAAA   1
  *|*||||*||||||||||||
targets:2264   UGUCAUACUUCACCAUCUUU   2283

2.5 PREDICTED: Vitis vinifera Golgi transport complex-related-like (LOC100247220), mRNA NA coding protein psRNATarget