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BaseInfo

ncRNA ID novel_vvi_miR228
Species Vitis vinifera
Class miRNA
Genome position Chr7:20911319-20911519 [-]
Reference genome 12X
Source SRR1528350
Length 24
Mature sequence(if miRNA) 178 - GAACAUAGAUUACUUUAGAGGACU - 201
Stem-loop(if miRNA) --        AU  C        A       U  C   A     UG   AUUUU             --G   U     -GUUGA      AGCU     GC
  GAACAUAG  UA UUUAGAGG CUUCUAA UG UAC CAAUG  AAA     GAGGGGAAAAUUC   UGU UGAUA      UAUCAG    UCAUU  A
  ||||||||  || |||||||| ||||||| || ||| |||||  |||     |||||||||||||   ||| |||||      ||||||    |||||  C
  CUUGUAUC  AU GAAUCUCC GAAGAUU GC GUG GUUGU  UUU     UUCCCCUUUUAAG   GCG ACUAU      GUGGUU    AGUAA  U
CA        CU  C        C       U  A   A     GU   AUAAU             GAA   C     GUGAAG      -GGU     AA
Stem-loop sequence GAACAUAGAUUACUUUAGAGGACUUCUAAUUGCUACACAAUGUGAAAAUUUUGAGGGGAAAAUUCGUGUUUGAUAGUUGAUAUCAGAGCUUCAUUGCACUAAAAUGAUGGUUGGUGGAAGUGUAUCACGCGAAGGAAUUUUCCCCUUUAAUAUUUUGUGUUGAGUGACGUUUAGAAGCCCUCUAAGCUAUCCUAUGUUCAC