ncRNA ID | novel_vvi_miR221 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr10:1923615-1923823 [+] |
Reference genome | 12X |
Source | SRR1048203 |
Length | 24 |
Mature sequence(if miRNA) | 186 - UCUAGUGUCAUUUCUUCCAUUAAA - 209 |
Stem-loop(if miRNA) |
--     A    U     U         A    UGUU    ---A  --          ------    ---             GG  -             -A    GUAAA   UAAUG AAGA AUGAC CUAGGUAAA UUGG    GGGA    AA  AUUCAUGUAG      CCAA   ACCCAAGUAGUUG  AU UAAGGUUUUGUUG  GUUG     A   ||||| |||| ||||| ||||||||| ||||    ||||    ||  ||||||||||      ||||   |||||||||||||  || |||||||||||||  ||||   AUUAC UUCU UACUG GAUCUAUUU AACU    UCUU    UU  UAAGUGCAUU      GGUU   UGGGUUUAUCAAC  UG AUUCCGAAACAAC  CAAC     C AA     C    U     U         C    ---U    GUUG  AC          CAAGUG    UAA             UU  U             AA    AACAA |
Stem-loop sequence | UAAUGAAAGAUAUGACUCUAGGUAAAAUUGGUGUUGGGAAAAAUUCAUGUAGCCAAACCCAAGUAGUUGGGAUUAAGGUUUUGUUGAGUUGGUAAAACAACAACAACAACAACAAAGCCUUAUGUUUCAACUAUUUGGGUAAUUUGGGUGAACUUACGUGAAUCAUUGUUGUUCUUUCAACUUUAUCUAGUGUCAUUUCUUCCAUUAAA |