ncRNA ID | novel_vvi_miR218 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr5:9216739-9216792 [-] |
Reference genome | 12X |
Source | SRR1049373;SRR1048205;SRR1048207 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGUCAAAGCCGUAGUCACCAAC - 24 |
Stem-loop(if miRNA) |
--           AA           U   UGGUGACUAUG  UUUGACUGUUU U   |||||||||||  |||||||||||   ACCACUGAUGC  AAACUGAUAAA A CA           CG           A |
Stem-loop sequence | UGGUGACUAUGAAUUUGACUGUUUUUAAAAAUAGUCAAAGCCGUAGUCACCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
1.5 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |