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BaseInfo

ncRNA ID novel_vvi_miR217
Species Vitis vinifera
Class miRNA
Genome position Chr2:16568707-16568888 [-]
Reference genome 12X
Source SRR1049373
Length 27
Mature sequence(if miRNA) 156 - ACCAUCACUUUUAUCAUCAUUUUUAUC - 182
Stem-loop(if miRNA) --           U                    U        U       C      GG     ---   U     -----          A  A
  ACCAUCACUUU AUCAUCAUUUUUAUCACUUG UGAUGUGG AGGUAGU AUUGGU  UAAAA   GGA AAUAA     AAGCAAAAUA GA U
  ||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||  |||||   ||| |||||     |||||||||| ||
  UGGUGGUGAAG UAGUGGUAAAAAUAGUGAAU ACUACAUU UCUAUCA UAAUCA  AUUUU   CCU UUGUU     UUUGUUUUAU CU G
UA           U                    U        U       C      AA     UUA   -     CUUAA          -  U
Stem-loop sequence ACCAUCACUUUUAUCAUCAUUUUUAUCACUUGUUGAUGUGGUAGGUAGUCAUUGGUGGUAAAAGGAUAAUAAAAGCAAAAUAAGAAUGUUCUAUUUUGUUUAAUUCUUGUUUCCAUUUUUUAAAACUAAUCACUAUCUUUUACAUCAUUAAGUGAUAAAAAUGGUGAUUGAAGUGGUGGUAU