ncRNA ID | novel_vvi_miR217 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr2:16568707-16568888 [-] |
Reference genome | 12X |
Source | SRR1049373 |
Length | 27 |
Mature sequence(if miRNA) | 156 - ACCAUCACUUUUAUCAUCAUUUUUAUC - 182 |
Stem-loop(if miRNA) |
--           U                    U        U       C      GG     ---   U     -----          A  A   ACCAUCACUUU AUCAUCAUUUUUAUCACUUG UGAUGUGG AGGUAGU AUUGGU  UAAAA   GGA AAUAA     AAGCAAAAUA GA U   ||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||  |||||   ||| |||||     |||||||||| ||   UGGUGGUGAAG UAGUGGUAAAAAUAGUGAAU ACUACAUU UCUAUCA UAAUCA  AUUUU   CCU UUGUU     UUUGUUUUAU CU G UA           U                    U        U       C      AA     UUA   -     CUUAA          -  U |
Stem-loop sequence | ACCAUCACUUUUAUCAUCAUUUUUAUCACUUGUUGAUGUGGUAGGUAGUCAUUGGUGGUAAAAGGAUAAUAAAAGCAAAAUAAGAAUGUUCUAUUUUGUUUAAUUCUUGUUUCCAUUUUUUAAAACUAAUCACUAUCUUUUACAUCAUUAAGUGAUAAAAAUGGUGAUUGAAGUGGUGGUAU |