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BaseInfo

ncRNA ID	novel_vvi_miR196
Species	Vitis vinifera
Class	miRNA
Genome position	Chr3:15185379-15185459 [+]
Reference genome	12X
Source	SRR1049372
Length	21
Mature sequence(if miRNA)	61 - UGUUGGAUGAUGUCAACAUGU - 81
Stem-loop(if miRNA)	--CUA                  A     U       AUU      UUGACAUUAUCCAAUAUA UUAAA UGAACUU   G      |||||||||||||||||| ||||| |||||||   A      AACUGUAGUAGGUUGUAU GAUUU ACUUGAA   U UGUAC                  A     U       CAA
Stem-loop sequence	CUAUUGACAUUAUCCAAUAUAAUUAAAUUGAACUUAUUGAUAACAAGUUCAUUUUAGAUAUGUUGGAUGAUGUCAACAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA142775.1	ncRNA:21   UGUACAACUGUAGUAGGUUGU   1   ||=||||*||||||||||||| targets:1295   ACGUGUUAACAUCAUCCAACA   1315 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_3457_Transcript_8/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142774.1	ncRNA:21   UGUACAACUGUAGUAGGUUGU   1   ||=||||*||||||||||||| targets:1395   ACGUGUUAACAUCAUCCAACA   1415 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_3457_Transcript_5/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002276314.3	ncRNA:21   UGUACAACUGUAGUAGGUUGU   1   |*||||*||||||||=||||| targets:989   AAAUGUGGACAUCAUUCAACA   1009 Target Full Sequence	2.5	PREDICTED: Vitis vinifera nodulation-signaling pathway 2 protein (LOC100248787), mRNA	NA	coding protein	psRNATarget
KA161886.1	ncRNA:21   UGUACAACUGUAGUAGGUUGU   1   ||*|*|||||||||||||||= targets:216   ACUUAUUGACAUCAUCCAACG   236 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence	NA	coding protein	psRNATarget