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BaseInfo

ncRNA ID	novel_gma_miR7887
Species	Glycine max
Class	miRNA
Genome position	Chr19:45046625-45046782 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	19
Mature sequence(if miRNA)	140 - AAGAAGCAGAAUUUUGAAG - 158
Stem-loop(if miRNA)	--    AGCA         --       UA  U    -------C    GUU  U   UAG        GAGACUAGCCUCGAA   AAGA    GAAUUUUGA  AGUGGAA  AG GAAG        GCUA   CA CUU   UGAGGCAG               A   ||||    |||||||||  |||||||  || ||||        ||||   || |||   ||||||||   UUCU    UUUAGGAUU  UCAUUUU  UC CUUC        CGAU   GU GAA   UGGAUCGU               U AG    GCUA         UU       UA  -    UACCCACA    AGU  U   UAA        UCCGUGUACAUGAUC
Stem-loop sequence	AAGAAGCAGAAUUUUGAAGUGGAAUAAGUGAAGCGCUAGUUCAUCUUUAGUGAGGCAGGAGACUAGCCUCGAAAUCUAGUACAUGUGCCUUGCUAGGUAAUAAGUUGUGAUAGCACACCCAUCUUCCUAUUUUUACUUUUUAGGAUUUAUCGUCUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006587320.2	ncRNA:19   GAAGUUUUAAGACGAAGAA   1   *|||||||||||||||||* targets:203   GUUCAAAAUUCUGCUUCUG   221 Target Full Sequence	2.0	PREDICTED: Glycine max AT-hook motif nuclear-localized protein 6-like (LOC102667678), mRNA	AT-hook motif nuclear-localized protein 6-like(LOC102667678)	coding protein	psRNATarget
XM_006599894.1	ncRNA:19   GAAGUUUUAAGACGAAGAA   1   ||||*|||||||*|||||| targets:61   CUUCCAAAUUCUCCUUCUU   79 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein SKIP23-like (LOC102664929), mRNA	F-box protein SKIP23-like(LOC102664929)	coding protein	psRNATarget
XM_006574592.2	ncRNA:19   GAAGUUUUAAGACGAAGAA   1   ||||*|||||||*|||||| targets:406   CUUCCAAAUUCUCCUUCUU   424 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein At2g26160-like (LOC102666149), transcript variant X1, mRNA	F-box protein At2g26160-like(LOC102666149)	coding protein	psRNATarget
XM_006574593.2	ncRNA:19   GAAGUUUUAAGACGAAGAA   1   ||||*|||||||*|||||| targets:408   CUUCCAAAUUCUCCUUCUU   426 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein At2g26160-like (LOC102666149), transcript variant X2, mRNA	F-box protein At2g26160-like(LOC102666149)	coding protein	psRNATarget
XM_014773059.1	ncRNA:19   GAAGUUUUAAGACGAAGAA   1   ||||*|||*|||||||||| targets:2568   CUUCUAAAAUCUGCUUCUU   2586 Target Full Sequence	2.5	PREDICTED: Glycine max putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (LOC100806677), transcript variant X2, mRNA	putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3(LOC100806677)	coding protein	psRNATarget
XM_006605701.2	ncRNA:19   GAAGUUUUAAGACGAAGAA   1   ||||*|||*|||||||||| targets:2571   CUUCUAAAAUCUGCUUCUU   2589 Target Full Sequence	2.5	PREDICTED: Glycine max putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (LOC100806677), transcript variant X1, mRNA	putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3(LOC100806677)	coding protein	psRNATarget