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BaseInfo

ncRNA ID novel_gma_miR7866
Species Glycine max
Class miRNA
Genome position Chr18:6635798-6635869 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 1 - UAAGGAGAUUUCUGAAUAUGCAUU - 24
Stem-loop(if miRNA) --   G   -       AA      UUUGC  UG UA
  UAA GAG AUUUCUG  UAUGCA     UU  A  U
  ||| ||| |||||||  ||||||     ||  |
  AUU CUC UAAGGAC  AUAUGU     AA  U  A
AC   G   A       AC      -UCUU  GU CU
Stem-loop sequence UAAGGAGAUUUCUGAAUAUGCAUUUGCUUUGAUAUAUCUUGAAUUCUUGUAUACACAGGAAUACUCGUUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777942.1
ncRNA:24   UUACGUAUAAGUCUUUAGAGGAAU   1
  ||--|*|=||||||||||||||||
targets:2100   AA--CUUGUUCAGAAAUCUCCUUA   2121

2.0 PREDICTED: Glycine max eukaryotic translation initiation factor 4G-like (LOC100798562), transcript variant X2, mRNA eukaryotic translation initiation factor 4G-like(LOC100798562) coding protein psRNATarget
XM_006583454.2
ncRNA:24   UUACGUAUAAGUCUUUAGAGGAAU   1
  ||--|*|=||||||||||||||||
targets:2109   AA--CUUGUUCAGAAAUCUCCUUA   2130

2.0 PREDICTED: Glycine max eukaryotic translation initiation factor 4G-like (LOC100798562), transcript variant X1, mRNA eukaryotic translation initiation factor 4G-like(LOC100798562) coding protein psRNATarget